ChrX-STR.org 2.0
Database and information hub for forensic X-chromosomal markers



Marker DXS10011

Create date: Jun 25, 2009 12:18:15 PM
Last update: Jun 25, 2009 12:24:02 PM
Cytogenetic localisation: q 28.00
Physical localisation NCBI 36: 150.939
Rutgers Map v.2: 188.70
Reference: Watanabe G, Umetsu K, Yuasa I, Suzuki T (2000) DXS10011: a hypervariable tetran...

Primer

PrimerF: 5' - CTGAGATTGCACCATTGCAC - 3'
PrimerR: 5' - TGGGAGAACCRTTTGAAGTT - 3'
Comment: R: A wobble of A and G is recommended

Typical structure

AllelebpsSequence composition
26-29221-233(GAAA)17-  20 GAAG GAAA (GGAA)4 (AGAA)3
29.2135GAAA GA (GAAA)6 GAGA (GAAA)12 GAAG GAAA (GGAA)4 (AGAA)3
30237(GAAA)21 GAAG GAAA (GGAA)4 (AGAA)3
30.2239GAAA GA (GAAA)6 GAGA (GAAA)13 GAAG GAAA (GGAA)4 (AGAA)3
31241(GAAA)22 GAAG GAAA (GGAA)4 (AGAA)3
31.2243GAAA GA (GAAA)6 GAGA (GAAA)14 GAAG GAAA (GGAA)4 (AGAA)3
32245(GAAA)23 GAAG GAAA (GGAA)4 (AGAA)3
32.2247GAAA GA (GAAA)6 GAGA (GAAA)15 GAAG GAAA (GGAA)4 (AGAA)3
32.2*247GAAA GA (GAAA)7 GAGA (GAAA)14 GAAG GAAA (GGAA)4 (AGAA)3
33249(GAAA)24 GAAG GAAA (GGAA)4 (AGAA)3
33.2251GAAA GA (GAAA)6 GAGA (GAAA)16 GAAG GAAA (GGAA)4 (AGAA)3
33.2*251GAAA GA (GAAA)7 GAGA (GAAA)15 GAAG GAAA (GGAA)4 (AGAA)3
34253(GAAA)25 GAAG GAAA (GGAA)4 (AGAA)3
34.2255GAAA GA (GAAA)7 GAGA (GAAA)16 GAAG GAAA (GGAA)4 (AGAA)3
34.2*255GAAA GA (GAAA)8 GAGA (GAAA)15 GAAG GAAA (GGAA)4 (AGAA)3
35257(GAAA)26 GAAG GAAA (GGAA)4 (AGAA)3
35.2259GAAA GA (GAAA)6 GAGA (GAAA)18 GAAG GAAA (GGAA)4 (AGAA)3
36261(GAAA)27 GAAG GAAA (GGAA)4 (AGAA)3
36.2263GAAA GA (GAAA)6 GAGA (GAAA)19 GAAG GAAA (GGAA)4 (AGAA)3
37-40265-277(GAAA)28-31GAAG GAAA (GGAA)4 (AGAA)3
40*277(GAAA)33 (GGAA)5 (AGAA)2
41-43281-289(GAAA)32-34 GAAG GAAA (GGAA)4 (AGAA)3
43.3292(GAAA)31 GAA (GAAA)3 GAAG GAAA (GGAA)4 (AGAA)3
44-50293-317(GAAA)35 - 41 GAAG GAAA (GGAA)4 (AGAA)3

Cell line DNAAllele
K562 (BRL)29
K562 (Promega)29
NA365738
NA9947A36-38
NA994831.2
References: Hering S, Brundirs N, Kuhlisch E, Edelmann J, Plate I, Benecke M, Van PH, Micha...

Population data

The values of the evaluation parameters presented in the following table are calculated live utilizing the population data presented in the corresponding reference. For this reason it may happen that the numbers differ from the figures given in the reference. Click here to view the equations our calculations are based on.
IDPopulationReferencePICHETMEC KrügerMEC KishidaMEC DesmaraisMEC Desmarais duoPD femalePD male
1Germany (East)Hering ...0.94390.94660.89160.94370.94390.89650.99450.9466
2Germany (North East)Poetsch...0.94510.94760.88860.93980.94510.89850.99470.9476
3LatviaPoetsch...0.93930.94230.88330.93940.93930.88860.99360.9423
4TaiwanChen MY...0.95410.95590.90860.95200.95410.91400.99620.9559
ID Population Ethnic specification Reference n* 18 19 20 21 21.2 22 22.2 23 23.2 24 24.2 25 25.2 26 26.2 27 27.2 28 29 29.2 30 30.2 31 31.2 32 32.2 33 33.2 34 34.2 35 35.2 36 36.2 37 38 39 40 41 42 43 43.3 44 45 46 47 48 49 50
1 Germany (East) Caucasian (European) Hering ... 1328 0.0005 0.0052 0.0147 0.0215 0.0042 0.0115 0.0262 0.0136 0.0649 0.0262 0.0842 0.0215 0.0382 0.0429 0.0204 0.0581 0.0047 0.0706 0.0026 0.0738 0.0816 0.0586 0.0701 0.0502 0.0481 0.0319 0.0005 0.0220 0.0173 0.0063 0.0052 0.0010 0.0010 0.0005
2 Germany (North East) Caucasian (European) Poetsch... 205 0.0130 0.0390 0.0070 0.0100 0.0300 0.0100 0.0700 0.0500 0.0750 0.0230 0.0590 0.0430 0.0230 0.0330 0.0130 0.0750 0.0030 0.0590 0.0890 0.0100 0.0530 0.0560 0.0460 0.0530 0.0230 0.0160 0.0070 0.0070
3 Latvia Caucasian (European) Poetsch... 152 0.0203 0.0270 0.0203 0.0811 0.0068 0.0946 0.0270 0.0743 0.0541 0.0405 0.0135 0.0676 0.0270 0.0743 0.0473 0.0878 0.0338 0.0676 0.0270 0.0338 0.0135 0.0203 0.0203 0.0135 0.0068
4 Taiwan all Chen MY... 273 0.0050 0.0250 0.0470 0.0470 0.0080 0.0490 0.0110 0.0300 0.0470 0.0410 0.0490 0.0490 0.0380 0.0270 0.0050 0.0330 0.0080 0.0630 0.0550 0.0550 0.0680 0.0470 0.0550 0.0410 0.0270 0.0300 0.0080 0.0110 0.0050 0.0080 0.0030 0.0030
n* - If no information on the sex of the studied individuals is indicated, both sexes were examined.

References

Note

No data.

News

Based on the review of december 2018, it has been decided in cooperation with the X working group to remove the PI calculation from this website.