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Marker DXS9902
Create date: |
Jun 25, 2009 12:18:12 PM |
Last update: |
Sep 24, 2010 11:26:04 AM |
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Cytogenetic localisation: |
p 22.20 |
Physical localisation NCBI 36: |
15.234 |
Genetic localisation deCODE: |
29.55 |
Rutgers Map v.2: |
32.32 |
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Reference: |
Edelmann J, Hering, S, Michael, M, Lessig, R, Deichsel, D, Meier-Sundhausen, G,... |
Primer
PrimerF: |
5' - |
TGG AGT CTC TGG GTG AAG AG |
- 3' |
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PrimerR: |
5' - |
CAG GAG TAT GGG ATC ACC AG |
- 3' |
Typical structureNo repeat structure data.
K562 (BRL) | 11, 12 | K562 (Promega) | 11, 12 | NA3657 | 12 | NA9947A | 11, 11 | NA9948 | 12 |
Population dataThe values of the evaluation parameters presented in the following table are calculated live utilizing the population data presented in the corresponding reference. For this reason it may happen that the numbers differ from the figures given in the reference. Click here to view the equations our calculations are based on.1 | Belo Horizonte, Brazil | Genetic... | 0.6551 | 0.7102 | 0.4519 | 0.6549 | 0.6551 | 0.5112 | 0.8609 | 0.7102 | 2 | Germany | Edelman... | 0.6363 | 0.6963 | 0.4274 | 0.6363 | 0.6363 | 0.4905 | 0.8477 | 0.6963 | 3 | Korea | Shin SH... | 0.5845 | 0.6509 | 0.3760 | 0.5833 | 0.5845 | 0.4377 | 0.8118 | 0.6509 | 4 | Rio de Janeiro, Brazil | Genetic... | 0.6601 | 0.7113 | 0.4630 | 0.6600 | 0.6601 | 0.5171 | 0.8654 | 0.7113 | 5 | São Paulo, Brazil | Genetic... | 0.6314 | 0.6908 | 0.4250 | 0.6312 | 0.6314 | 0.4858 | 0.8450 | 0.6908 | 6 | Vitória, Brazil | Genetic... | 0.6379 | 0.6956 | 0.4338 | 0.6379 | 0.6379 | 0.4929 | 0.8496 | 0.6956 |
1 |
Belo Horizonte, Brazil |
admixed |
Genetic... |
245 |
|
|
0.0170 |
0.0395 |
0.3230 |
|
0.3400 |
0.0055 |
0.2605 |
|
0.0087 |
0.0028 |
0.0028 |
2 |
Germany |
Caucasian (European) |
Edelman... |
414 |
|
|
0.0480 |
0.3140 |
0.3640 |
|
0.2650 |
|
0.0090 |
|
|
|
|
3 |
Korea |
Asian (Korean) |
Shin SH... |
401 |
0.0120 |
0.0020 |
0.0120 |
0.4530 |
0.3340 |
|
0.1790 |
|
0.0070 |
|
|
|
|
4 |
Rio de Janeiro, Brazil |
admixed |
Genetic... |
261 |
|
|
0.0246 |
0.0443 |
0.3251 |
0.0025 |
0.3719 |
0.0074 |
0.2044 |
0.0049 |
0.0148 |
|
|
5 |
São Paulo, Brazil |
admixed |
Genetic... |
250 |
|
0.0024 |
0.0072 |
0.0314 |
0.3840 |
|
0.3285 |
0.0072 |
0.2295 |
0.0048 |
0.0048 |
|
|
6 |
Vitória, Brazil |
admixed |
Genetic... |
245 |
|
0.0025 |
0.0222 |
0.0222 |
0.3457 |
|
0.3679 |
0.0148 |
0.2198 |
|
0.0049 |
|
|
n* - If no information on the sex of the studied individuals is indicated, both sexes were examined.
References
- Gomes I, Pereira R, Mayr WR, Amorim A, Carracedo A, Gusmao L (2009) Evaluation of DXS9902, DXS7132,...
- Gusmao L, Sanchez-Diz P, Alves C, Gomes I, Zarrabeitia MT, Abovich M, Atmetlla I, Bobillo C, Bravo ...
- Indsto JO, Nassif NT, Kefford RF, Mann GJ (2003) Frequent loss of heterozygosity targeting the inac...
- Li H, Tang H, Zhang Q, Jiao Z, Bai J, Chang S (2009) A multiplex PCR for 4 X chromosome STR markers...
- Shin SH, Yu JS, Park SW, Min GS, Chung KW (2005) Genetic analysis of 18 X-linked short tandem repea...
- Silva F, Pereira R, Gusmao L, Santos C, Amorim A, Prata MJ, Bettencourt C, Lourenco P, Lima M (2009...
- Tariq MA, Ullah O, Riazuddin SA, Riazuddin S (2008) Allele frequency distribution of 13 X-chromosom...
NoteNo data.
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News
Based on the review of december 2018, it has been decided in cooperation with the X working group to remove the PI calculation from this website.
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