|
Marker DXS101
Primer
PrimerF: |
5' - |
ACT CTA AAT CAG TCC AAA TAT CT |
- 3' |
![](/xdb/a4j/g/3_3_0.GAimages/spacer.gif)
PrimerR: |
5' - |
AAA TCA CTC CAT GGC ACA TGT AT |
- 3' |
Typical structure15 | 182 | Pr.1-N38-(CTT)6-(ATT)9-N53-Pr.2 | 16 | 185 | Pr.1-N38-(CTT)6-(ATT)10-N53-Pr.2 | 18 | 191 | Pr.1-N38-(CTT)8-(ATT)10-N53-Pr.2 | 21 | 200 | Pr.1-N38-(CTT)17-(ATT)4-N53-Pr.2 | 22 | 203 | Pr.1-N38-(CTT)16-(ATT)6-N53-Pr.2 | 23 | 206 | Pr.1-N38-(CTT)15-(ATT)7-N53-Pr.2 | 24 | 209 | Pr.1-N38-(CTT)15-(ATT)9-N53-Pr.2 | 25 | 212 | Pr.1-N38-(CTT)13-(ATT)12-N53-Pr.2 | 26 | 215 | Pr.1-N38-(CTT)14-(ATT)12-N53-Pr.2 | 28 | 221 | Pr.1-N38-(CTT)17-(ATT)11-N53-Pr.2 | 30 | 227 | Pr.1-N38-(CTT)19-(ATT)11-N53-Pr.2 |
![](/xdb/a4j/g/3_3_0.GAimages/spacer.gif)
Comment: |
(Allele 24 with four isoallels); N= Nucleotide |
K562 (BRL) | 24 | K562 (Promega) | 23, 24 | NA3657 | 24 | NA9947A | 24, 26 | NA9948 | 25 |
Population dataThe values of the evaluation parameters presented in the following table are calculated live utilizing the population data presented in the corresponding reference. For this reason it may happen that the numbers differ from the figures given in the reference. Click here to view the equations our calculations are based on.1 | Austria | Wiegand... | 0.8519 | 0.8654 | 0.7298 | 0.8475 | 0.8519 | 0.7544 | 0.9684 | 0.8654 | 2 | Chinese | Tabbada... | 0.7687 | 0.7980 | 0.6038 | 0.7687 | 0.7687 | 0.6428 | 0.9299 | 0.7980 | 3 | Finland | Vauhkon... | 0.8246 | 0.8397 | 0.6968 | 0.8246 | 0.8246 | 0.7178 | 0.9591 | 0.8397 | 4 | Germany | Fracass... | 0.8703 | 0.8812 | 0.7628 | 0.8692 | 0.8703 | 0.7808 | 0.9750 | 0.8812 | 5 | Germany | Tabbada... | 0.8707 | 0.8817 | 0.7645 | 0.8713 | 0.8707 | 0.7812 | 0.9750 | 0.8817 | 6 | Germany (East) | Edelman... | 0.8707 | 0.8816 | 0.7622 | 0.8685 | 0.8707 | 0.7814 | 0.9752 | 0.8816 | 7 | Germany (East) | Edelman... | 0.8798 | 0.8892 | 0.7789 | 0.8787 | 0.8798 | 0.7949 | 0.9783 | 0.8892 | 8 | Germany (East) | Edelman... | 0.8784 | 0.8880 | 0.7765 | 0.8773 | 0.8784 | 0.7929 | 0.9779 | 0.8880 | 9 | Germany (North East) | Poetsch... | 0.8635 | 0.8755 | 0.7512 | 0.8624 | 0.8635 | 0.7709 | 0.9725 | 0.8755 | 10 | Germany (South) | Wiegand... | 0.8650 | 0.8763 | 0.7571 | 0.8661 | 0.8650 | 0.7734 | 0.9734 | 0.8763 | 11 | Italy (Tuscany) | Toni C,... | 0.8675 | 0.8789 | 0.7609 | 0.8697 | 0.8675 | 0.7765 | 0.9740 | 0.8789 | 12 | Japanese | Tabbada... | 0.7793 | 0.8049 | 0.6214 | 0.7793 | 0.7793 | 0.6562 | 0.9363 | 0.8049 | 13 | Korea | Shin KJ... | 0.7928 | 0.8170 | 0.6404 | 0.7928 | 0.7928 | 0.6738 | 0.9424 | 0.8170 | 14 | Korea | Shin SH... | 0.7934 | 0.8180 | 0.6445 | 0.7980 | 0.7934 | 0.6743 | 0.9423 | 0.8180 | 15 | Latvia | Poetsch... | 0.8395 | 0.8528 | 0.7194 | 0.8399 | 0.8395 | 0.7382 | 0.9650 | 0.8528 | 16 | Philippine | Tabbada... | 0.7600 | 0.7884 | 0.5970 | 0.7602 | 0.7600 | 0.6330 | 0.9268 | 0.7884 | 17 | Portugal (North) | Pereira... | 0.8747 | 0.8855 | 0.7697 | 0.8747 | 0.8747 | 0.7868 | 0.9761 | 0.8855 | 18 | Spain (Cantabria) | Zarrabe... | 0.8626 | 0.8744 | 0.7497 | 0.8604 | 0.8626 | 0.7699 | 0.9724 | 0.8744 | 19 | Spain (Valencia) | Aler M,... | 0.8418 | 0.8561 | 0.7199 | 0.8415 | 0.8418 | 0.7408 | 0.9650 | 0.8561 | 20 | Taiwan | Chen MY... | 0.7693 | 0.7952 | 0.6119 | 0.7704 | 0.7693 | 0.6445 | 0.9321 | 0.7952 | 21 | Thai | Tabbada... | 0.7878 | 0.8120 | 0.6354 | 0.7880 | 0.7878 | 0.6678 | 0.9404 | 0.8120 |
1 |
Austria |
Caucasian (European) |
Wiegand... |
270 females |
|
0.0230 |
0.0040 |
|
0.0900 |
0.0260 |
0.0150 |
0.0110 |
0.0150 |
0.0600 |
0.2370 |
0.1690 |
0.1540 |
0.0860 |
0.0640 |
0.0340 |
0.0080 |
|
|
2 |
Chinese |
Asian |
Tabbada... |
90 |
|
|
|
|
|
|
|
|
0.0500 |
0.1500 |
0.2600 |
0.2700 |
0.1800 |
0.0600 |
0.0200 |
0.0100 |
|
|
|
3 |
Finland |
Caucasian |
Vauhkon... |
103 |
|
0.0410 |
0.0070 |
|
0.0960 |
0.0270 |
0.0270 |
0.0340 |
0.0140 |
0.0410 |
0.3080 |
0.1920 |
0.0890 |
0.0550 |
0.0410 |
0.0210 |
0.0070 |
|
|
4 |
Germany |
Area of Münster |
Fracass... |
217 both |
|
0.0360 |
0.0030 |
|
0.0650 |
0.0460 |
0.0200 |
0.0290 |
0.0200 |
0.0820 |
0.2060 |
0.1760 |
0.1370 |
0.0650 |
0.0750 |
0.0230 |
0.0160 |
|
|
5 |
Germany |
Caucasian (European) |
Tabbada... |
105 |
|
0.0313 |
|
|
0.0938 |
0.0313 |
0.0188 |
0.0313 |
0.0063 |
0.0625 |
0.1688 |
0.2000 |
0.1375 |
0.0938 |
0.0688 |
0.0250 |
0.0250 |
|
0.0063 |
6 |
Germany (East) |
Caucasian (European) |
Edelman... |
216 males |
|
0.0370 |
0.0050 |
|
0.0780 |
0.0690 |
0.0140 |
0.0420 |
0.0140 |
0.0460 |
0.2170 |
0.1390 |
0.1480 |
0.0880 |
0.0740 |
0.0090 |
0.0180 |
|
|
7 |
Germany (East) |
Caucasian (European) |
Edelman... |
348 females |
0.0030 |
0.0460 |
0.0060 |
0.0030 |
0.0860 |
0.0400 |
0.0110 |
0.0290 |
0.0240 |
0.0720 |
0.2100 |
0.1610 |
0.1030 |
0.0760 |
0.0690 |
0.0330 |
0.0260 |
|
0.0010 |
8 |
Germany (East) |
Caucasian (European) |
Edelman... |
564 |
0.0020 |
0.0440 |
0.0050 |
0.0020 |
0.0840 |
0.0470 |
0.0120 |
0.0320 |
0.0220 |
0.0660 |
0.2120 |
0.1560 |
0.1140 |
0.0790 |
0.0700 |
0.0270 |
0.0240 |
|
0.0010 |
9 |
Germany (North East) |
Caucasian (European) |
Poetsch... |
205 |
0.0030 |
0.0160 |
|
0.0100 |
0.0620 |
0.0460 |
0.0360 |
0.0100 |
0.0130 |
0.0850 |
0.2000 |
0.1770 |
0.1670 |
0.0690 |
0.0690 |
0.0160 |
0.0200 |
|
|
10 |
Germany (South) |
Caucasian (European) |
Wiegand... |
214 females |
|
0.0330 |
0.0050 |
0.0050 |
0.0790 |
0.0470 |
0.0190 |
0.0330 |
0.0230 |
0.0560 |
0.2290 |
0.1640 |
0.1400 |
0.0890 |
0.0330 |
0.0230 |
0.0230 |
|
|
11 |
Italy (Tuscany) |
Caucasian |
Toni C,... |
160 |
|
0.0380 |
0.0040 |
0.0040 |
0.1130 |
0.0670 |
0.0170 |
0.0330 |
0.0080 |
0.0290 |
0.2170 |
0.1210 |
0.1540 |
0.0630 |
0.0960 |
0.0380 |
|
|
|
12 |
Japanese |
Asian |
Tabbada... |
95 males |
|
|
|
|
|
|
|
|
0.0632 |
0.1368 |
0.3158 |
0.2000 |
0.1368 |
0.1158 |
0.0211 |
0.0105 |
|
|
|
13 |
Korea |
Asian (Korean) |
Shin KJ... |
300 |
|
|
|
|
|
|
|
0.0110 |
0.0380 |
0.1090 |
0.2780 |
0.2130 |
0.1800 |
0.1130 |
0.0400 |
0.0070 |
0.0110 |
|
|
14 |
Korea |
Asian (Korean) |
Shin SH... |
401 |
|
|
|
|
|
0.0020 |
|
0.0050 |
0.0360 |
0.1460 |
0.2560 |
0.2310 |
0.1710 |
0.0970 |
0.0390 |
0.0160 |
0.0040 |
0.0010 |
|
15 |
Latvia |
Caucasian (European) |
Poetsch... |
152 |
|
0.0068 |
|
0.0135 |
0.0676 |
0.0541 |
0.0203 |
0.0541 |
0.0338 |
0.0473 |
0.1824 |
0.2905 |
0.0946 |
0.0541 |
0.0541 |
|
0.0135 |
0.0068 |
0.0068 |
16 |
Philippine |
Asian |
Tabbada... |
115 |
|
|
|
|
|
|
0.0058 |
0.0058 |
0.0405 |
0.1792 |
0.3353 |
0.2254 |
0.0983 |
0.0578 |
0.0173 |
0.0347 |
|
|
|
17 |
Portugal (North) |
all |
Pereira... |
347 males |
0.0029 |
0.0202 |
0.0029 |
0.0058 |
0.0836 |
0.0461 |
0.0173 |
0.0288 |
0.0288 |
0.0922 |
0.1729 |
0.1527 |
0.1527 |
0.1268 |
0.0346 |
0.0259 |
0.0058 |
|
|
18 |
Spain (Cantabria) |
Caucasian (European) |
Zarrabe... |
131 |
|
0.0550 |
|
0.0050 |
0.0850 |
0.0750 |
0.0250 |
0.0150 |
0.0250 |
0.0450 |
0.1560 |
0.2210 |
0.1710 |
0.0300 |
0.0400 |
0.0250 |
0.0250 |
|
|
19 |
Spain (Valencia) |
all |
Aler M,... |
145 females |
|
0.0241 |
|
0.0069 |
0.0517 |
0.0448 |
0.0172 |
0.0379 |
0.0241 |
0.0655 |
0.1931 |
0.2586 |
0.1483 |
0.0655 |
0.0276 |
0.0276 |
0.0069 |
|
|
20 |
Taiwan |
all |
Chen MY... |
448 |
|
|
|
|
0.0020 |
0.0070 |
|
0.0090 |
0.0430 |
0.1290 |
0.3410 |
0.1970 |
0.1650 |
0.0550 |
0.0240 |
0.0150 |
0.0050 |
0.0070 |
0.0020 |
21 |
Thai |
Asian |
Tabbada... |
157 |
|
|
|
|
|
0.0051 |
|
0.0152 |
0.0556 |
0.1061 |
0.2525 |
0.2828 |
0.1414 |
0.0909 |
0.0354 |
0.0101 |
0.0051 |
|
|
n* - If no information on the sex of the studied individuals is indicated, both sexes were examined.
References
- Aler A, Sanchez-Diz P, Gomes I, Gisbert M, Carracedo A, Amorim A, Gusmao L (2007) Genetic data of 1...
- Allen RC, Belmont JW (1993) Trinucleotide Repeat Polymorphism at Dxs101. Human Molecular Genetics 2...
- Asamura H, Sakai H, Kobayashi K, Ota M, Fukushima H (2006) MiniX-STR multiplex system population st...
- Bini C, Ceccardi S, Ferri G, Pelotti S, Alu M, Roncaglia E, Beduschi G, Caenazzo L, Ponzano E, Tasi...
- Bini C, Ceccardi S, Ferri G, Pelotti S, Alu M, Roncaglia E, Beduschi G, Caenazzo L, Ponzano E, Tasi...
- Caggana M, Ashley GA, Desnick RJ, Eng CM (1997) Fabry disease: Molecular carrier detection and pren...
- Cambi F, Tang XM, Cordray P, Fain PR, Keppen LD, Barker DF (1996) Refined genetic mapping and prote...
- Carpenter NJ, Qu Y, Curtis M, Patil SR (1999) X-linked mental retardation syndrome with characteris...
- Catanesi CI, Martina PF, Giovambattista G, Zukas P, Vidal-Rioja L (2007) Geographic structure in gr...
- Chen MY, Pu CE (2004) Population data on the X chromosome short tandem repeat loci DXS10011, DXS101...
- Edelmann J, Hering S, Kuhlisch E, Szibor R (2002) Validation of the STR DXS7424 and the linkage sit...
- Edelmann J, Hering S, Kuhlisch E, Szibor R (2003) Validation of the X chromosomal STR DXS7424 which...
- Edelmann J, Hering, S, Michael, M, Lessig, R, Deichsel, D, Meier-Sundhausen, G, Roewer, L, Plate, I...
- Fracasso T, Schurenkamp M, Brinkmann B, Hohoff C (2008) An X-STR meiosis study in Kurds and Germans...
- Gomes I, Alves C, Maxzud K, Pereira R, Prata MJ, Sanchez-Diz P, Carracedo A, Amorim A, Gusmao L (20...
- Gomes I, Prinz M, Pereira R, Meyers C, Mikulasovich RS, Amorim A, Carracedo A, Gusmao L (2007) Gene...
- Gu SZ, Li SB (2006) X-chromosome STRs analysis of Ewenke ethnic population. Forensic Science Intern...
- Hertz JM, Kruse TA, Thomsen A, Spencer ES (1991) Multipoint Linkage Analysis in X-Linked Alport Syn...
- Kang LL, Li SB (2006) X-chromosome STR polymorphism of Luoba Ethnic Group living in Tibet (SW China...
- Lee HY, Park MJ, Jeong CK, Lee SY, Yoo JE, Chung U, Choi JH, Kim CY, Shin KJ (2004) Genetic charact...
- Lovering R, Middletonprice HR, Oreilly MAJ, Genet SA, Parkar M, Sweatman AK, Bradley LD, Alterman L...
- McGinniss MJ, Brown DH, Burke LW, Mascarello JT, Jones MC (1997) Ring chromosome X in a child with ...
- Oreilly MAJ, Sweatman AK, Bradley LD, Alterman LA, Lovering R, Malcolm S, Levinsky RJ, Kinnon C (19...
- Pelotti S, Bini C, Ceccardi S, Ferri G, Abbondanza A, Greggio NA, Ponzano E, Caenazzo L (2003) Sex ...
- Pereira R, Gomes I, Amorim A, Gusmao L (2007) Genetic diversity of 10 X chromosome STRs in northern...
- Pico A, Castillo A, Vargas C, Amorim A, Gusmao L (2008) Genetic profile characterization and segreg...
- Poetsch M, El-Mostaqim D, Tschentscher F, Browne E, Timmann C, Horstmann R, von Wurmb-Schwark N (20...
- Poetsch M, Petersmann H, Repenning A, Lignitz E (2005) Development of two pentaplex systems with X-...
- Poetsch M, Sabule A, Petersmann H, Volksone V, Lignitz E (2006) Population data of 10 X-chromosomal...
- Robino C, Giolitti A, Gino S, Torre C (2006) Development of two multiplex PCR systems for the analy...
- Shin KJ, Kwon BK, Lee SS, Yoo JE, Park MJ, Chung U, Lee HY, Han GR, Choi JH, Kim CY (2004) Five hig...
- Shin SH, Yu JS, Park SW, Min GS, Chung KW (2005) Genetic analysis of 18 X-linked short tandem repea...
- Sweatman A, Lovering R, Middletonprice H, Jones A, Morgan G, Levinsky R, Kinnon C (1993) A New Rest...
- Szibor R (2007) X-chromosomal markers: past, present and future. Forensic Sci Int Genet 1:93-99
- Szibor R, Edelmann J, Hering S, Plate I, Wittig H, Roewer L, Wiegand P, Cali F, Romano V, Michael M...
- Szibor R, Krawczak M, Hering S, Edelmann J, Kuhlisch E, Krause D (2003) Use of X-linked markers for...
- Tabbada KA, De Ungria MC, Faustino LP, Athanasiadou D, Stradmann-Bellinghausen B, Schneider PM (200...
- Tariq M, Sabir M, Riazuddin S, Riazuddin S (2009) Haplotype analysis of two X-chromosome STR cluste...
- Toni C, Presciuttini S, Spinetti I, Domenici R (2003) Population data of four X-chromosome markers ...
- Tranebjaerg L, Schwartz C, Eriksen H, Andreasson S, Ponjavic V, Dahl A, Stevenson RE, May M, Arena ...
- Tsezou A, Hadjiathanasiou C, Gourgiotis D, Galla A, Kavazarakis E, Pasparaki A, Kapsetaki M, Sisman...
- Turrina S, Atzei R, Filippini G, De Leo D (2007) Development and forensic validation of a new multi...
- Valle Y, Padilla-Gutierrez JR, Rodarte K, Quintero-Ramos A, Ortiz R, Hernandez-Zaragoza G, Rivas F ...
- Vauhkonen H, Vauhkonen M, Sipponen P, Sajantila A (2004) Correlation between the allelic distributi...
- Wiegand P, Berger B, Edelmann J, Parson W (2003) Population genetic comparisons of three X-chromoso...
- Yu B, Zhang HB, Li SB (2005) X-chromosome STRs polymorphisms of Han ethnic group from Northwest Chi...
- Zarrabeitia MT, Alonso A, Zarrabeitia A, Castro A, Fernandez I, de Pancorbo MM (2004) X-linked micr...
- Zarrabeitia MT, Amigo T, Sanudo C, Zarrabeitia A, Gonzalez-Lamuno D, Riancho JA (2002) A new pentap...
- Astrin KH, Falk CT, Vlasak I, Levran OS, Bernstein HS, Bishop DF, Desnick RJ (1989) Linkage between...
- Athanasiadou D, Stradmann-Bellinghausen B, Rittner C, Alt KW, Schneider PM (2003) Development of a ...
- Edelmann J, Lessig R, Hering S, Horn LC (2004) Loss of heterozygosity and microsatellite instabilit...
NoteNo data.
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News
Based on the review of december 2018, it has been decided in cooperation with the X working group to remove the PI calculation from this website.
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