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Marker DXS7424
| Create date: |
Jun 25, 2009 12:18:14 PM |
| Last update: |
Jul 6, 2009 8:11:47 AM |
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| Cytogenetic localisation: |
q 22.10 |
| Physical localisation NCBI 36: |
100.505 |
| Rutgers Map v.2: |
115.25 |
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| Reference: |
Edelmann J, Hering, S, Michael, M, Lessig, R, Deichsel, D, Meier-Sundhausen, G,... |
Primer
| PrimerF: |
5' - |
CTG CTT GAGTCC AGG AAT TCA A |
- 3' |
| PrimerR: |
5' - |
GAACAC GCACAT TTG AGA ACA TA |
- 3' |
Typical structure| 9-18 | 147-174 | PrF22-N37-(TAA)9-17 N38-PrR23 |
| Comment: |
Typical repeat structure: N= Nucleotide; N37 and N38, 37 and 38 non-polymorphic nucleotides; N37, 5'-GGCCTGCCTGGGAAACACAG GAAGACCCCA TCTCCAA-3'; N38, 5'-TGTGCGGGAT TCTTCTTAGC TGTAAATGCT GAAATGTA-3'. |
| K562 (BRL) | 17 | | K562 (Promega) | 17 | | NA3657 | 18 | | NA9947A | 14, 16 | | NA9948 | 16 |
| References: |
Edelmann J, Hering S, Kuhlisch E, Szibor R (2002) Validation of the STR DXS7424...
Szibor R, Edelmann J, Hering S, Plate I, Wittig H, Roewer L, Wiegand P, Cali F,...
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Population dataThe values of the evaluation parameters presented in the following table are calculated live utilizing the population data presented in the corresponding reference. For this reason it may happen that the numbers differ from the figures given in the reference. Click here to view the equations our calculations are based on.| 1 | Germany | Edelman... | 0.7656 | 0.7953 | 0.6004 | 0.7656 | 0.7656 | 0.6393 | 0.9284 | 0.7953 | | 2 | Germany | Edelman... | 0.7471 | 0.7792 | 0.5775 | 0.7471 | 0.7471 | 0.6173 | 0.9191 | 0.7792 | | 3 | Germany | Edelman... | 0.7625 | 0.7927 | 0.5966 | 0.7625 | 0.7625 | 0.6357 | 0.9269 | 0.7927 | | 4 | Germany (North East) | Poetsch... | 0.7463 | 0.7805 | 0.5726 | 0.7474 | 0.7463 | 0.6152 | 0.9176 | 0.7805 | | 5 | Korea | Lee HY,... | 0.6702 | 0.7162 | 0.4805 | 0.6714 | 0.6702 | 0.5283 | 0.8735 | 0.7162 | | 6 | Latvia | Poetsch... | 0.7782 | 0.8036 | 0.6219 | 0.7783 | 0.7782 | 0.6555 | 0.9360 | 0.8036 |
| 1 |
Germany |
Caucasian (European) |
Edelman... |
370 females |
0.0014 |
0.0027 |
0.0014 |
0.0365 |
0.0811 |
0.2460 |
0.2811 |
0.2149 |
0.1027 |
0.0203 |
0.0122 |
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| 2 |
Germany |
Caucasian (European) |
Edelman... |
394 males |
0.0025 |
0.0025 |
0.0102 |
0.0330 |
0.0457 |
0.1700 |
0.3071 |
0.2868 |
0.1066 |
0.0228 |
0.0102 |
0.0025 |
| 3 |
Germany |
Caucasian (European) |
Edelman... |
764 |
0.0018 |
0.0026 |
0.0044 |
0.0353 |
0.0688 |
0.2196 |
0.2901 |
0.2399 |
0.1041 |
0.0212 |
0.0115 |
0.0009 |
| 4 |
Germany (North East) |
Caucasian (European) |
Poetsch... |
205 |
|
0.0070 |
0.0030 |
0.0330 |
0.0390 |
0.2100 |
0.2560 |
0.2920 |
0.1480 |
0.0070 |
0.0030 |
0.0030 |
| 5 |
Korea |
Asian (Korean) |
Lee HY,... |
300 |
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|
0.0070 |
0.0670 |
0.1670 |
0.2960 |
0.4020 |
0.0420 |
0.0200 |
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| 6 |
Latvia |
Caucasian (European) |
Poetsch... |
152 |
|
0.0068 |
0.0068 |
0.0405 |
0.1081 |
0.3176 |
0.1824 |
0.2027 |
0.0811 |
0.0270 |
0.0203 |
0.0068 |
n* - If no information on the sex of the studied individuals is indicated, both sexes were examined.
References
- Asamura H, Sakai H, Kobayashi K, Ota M, Fukushima H (2006) MiniX-STR multiplex system population st...
- Caggana M, Ashley GA, Desnick RJ, Eng CM (1997) Fabry disease: Molecular carrier detection and pren...
- Dobrovolny R, Dvorakova L, Ledvinova J, Magage S, Bultas J, Lubanda JC, Poupetova H, Elleder M, Kar...
- Edelmann J, Hering S, Kuhlisch E, Szibor R (2002) Validation of the STR DXS7424 and the linkage sit...
- Edelmann J, Hering S, Kuhlisch E, Szibor R (2003) Validation of the X chromosomal STR DXS7424 which...
- Gu SZ, Li SB (2006) X-chromosome STRs analysis of Ewenke ethnic population. Forensic Science Intern...
- Kang LL, Li SB (2006) X-chromosome STR polymorphism of Luoba Ethnic Group living in Tibet (SW China...
- Lee HY, Park MJ, Jeong CK, Lee SY, Yoo JE, Chung U, Choi JH, Kim CY, Shin KJ (2004) Genetic charact...
- Liu QB, Li SB (2006) Patterns of genetic polymorphism at the 10 X-chromosome STR loci in Mongol pop...
- Poetsch M, El-Mostaqim D, Tschentscher F, Browne E, Timmann C, Horstmann R, von Wurmb-Schwark N (20...
- Poetsch M, Petersmann H, Repenning A, Lignitz E (2005) Development of two pentaplex systems with X-...
- Poetsch M, Sabule A, Petersmann H, Volksone V, Lignitz E (2006) Population data of 10 X-chromosomal...
- Robino C, Giolitti A, Gino S, Torre C (2006) Development of two multiplex PCR systems for the analy...
- Szibor R (2007) X-chromosomal markers: past, present and future. Forensic Sci Int Genet 1:93-99
- Szibor R, Edelmann J, Hering S, Plate I, Wittig H, Roewer L, Wiegand P, Cali F, Romano V, Michael M...
- Szibor R, Krawczak M, Hering S, Edelmann J, Kuhlisch E, Krause D (2003) Use of X-linked markers for...
- Tariq M, Sabir M, Riazuddin S, Riazuddin S (2009) Haplotype analysis of two X-chromosome STR cluste...
- Turrina S, Atzei R, De Leo D (2007) Polymorphism of four X-chromosomal STRs: DXS7423, DXS7424, DXS8...
- Turrina S, Atzei R, Filippini G, De Leo D (2007) Development and forensic validation of a new multi...
- Yu B, Zhang HB, Li SB (2005) X-chromosome STRs polymorphisms of Han ethnic group from Northwest Chi...
- Edelmann J, Lessig R, Hering S, Horn LC (2004) Loss of heterozygosity and microsatellite instabilit...
- Lee KL, Han MS, Jo BH, Park SW, Heo KB, Chung KW (2008) Development of two hexaplex systems with X-...
NoteNo data.
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News
Based on the review of december 2018, it has been decided in cooperation with the X working group to remove the PI calculation from this website.
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